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Characterization of centromeric satellite DNAs (MALREP) in the Asian swamp eel (Monopterus albus) suggests the possible origin of repeats from transposable elements.

Authors :
Suntronpong, Aorarat
Singchat, Worapong
Kruasuwan, Worarat
Prakhongcheep, Ornjira
Sillapaprayoon, Siwapech
Muangmai, Narongrit
Somyong, Suthasinee
Indananda, Chantra
Kraichak, Ekaphan
Peyachoknagul, Surin
Srikulnath, Kornsorn
Source :
Genomics. Sep2020, Vol. 112 Issue 5, p3097-3107. 11p.
Publication Year :
2020

Abstract

Centromeric satellite DNA (cen-satDNA) sequences of the Asian swamp eel (Monopterus albus) were characterized. Three GC-rich cen-satDNA sequences were detected as a 233 bp MALREP-A and a 293 bp MALREP-B localized to all chromosomes, and a 293 bp MALREP-C distributed on eight chromosome pairs. Sequence lengths of MALREP-B and MALREP-C were 60 bp larger than that of MALREP-A, showing partial homology with core sequences (233 bp). Size differences between MALREP-A and MALREP-B/C suggest the possible occurrence of two satDNA families. The presence of an additional 60 bp in MALREP-B/C resulted from an ancient dimer of 233 bp monomers and subsequent mutation and homogenization between the two monomers. All MALREPs showed partial homology with transposable elements (TEs), suggesting that the MALREPs originated from the TEs. The MALREPs might have been acquired in the Asian swamp eel, thereby promoting fixation in the species. • Three centromeric satellite DNA sequences were isolated from the Asian swamp eel. • All MALREPs originated from the transposable elements. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
08887543
Volume :
112
Issue :
5
Database :
Academic Search Index
Journal :
Genomics
Publication Type :
Academic Journal
Accession number :
144484249
Full Text :
https://doi.org/10.1016/j.ygeno.2020.05.024