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The Scatman: an approximate method for fast wide‐angle scattering simulations.

Authors :
Colombo, Alessandro
Zimmermann, Julian
Langbehn, Bruno
Möller, Thomas
Peltz, Christian
Sander, Katharina
Kruse, Björn
Tümmler, Paul
Barke, Ingo
Rupp, Daniela
Fennel, Thomas
Source :
Journal of Applied Crystallography. Oct2022, Vol. 55 Issue 5, p1232-1246. 15p.
Publication Year :
2022

Abstract

Single‐shot coherent diffraction imaging (CDI) is a powerful approach to characterize the structure and dynamics of isolated nanoscale objects such as single viruses, aerosols, nanocrystals and droplets. Using X‐ray wavelengths, the diffraction images in CDI experiments usually cover only small scattering angles of a few degrees. These small‐angle patterns represent the magnitude of the Fourier transform of the 2D projection of the sample's electron density, which can be reconstructed efficiently but lacks any depth information. In cases where the diffracted signal can be measured up to scattering angles exceeding ∼10°, i.e. in the wide‐angle regime, some 3D morphological information of the target is contained in a single‐shot diffraction pattern. However, the extraction of the 3D structural information is no longer straightforward and defines the key challenge in wide‐angle CDI. So far, the most convenient approach relies on iterative forward fitting of the scattering pattern using scattering simulations. Here the Scatman is presented, an approximate and fast numerical tool for the simulation and iterative fitting of wide‐angle scattering images of isolated samples. Furthermore, the open‐source software implementation of the Scatman algorithm, PyScatman, is published and described in detail. The Scatman approach, which has already been applied in previous work for forward‐fitting‐based shape retrieval, adopts the multi‐slice Fourier transform method. The effects of optical properties are partially included, yielding quantitative results for small, isolated and weakly interacting samples. PyScatman is capable of computing wide‐angle scattering patterns in a few milliseconds even on consumer‐level computing hardware, potentially enabling new data analysis schemes for wide‐angle coherent diffraction experiments. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00218898
Volume :
55
Issue :
5
Database :
Academic Search Index
Journal :
Journal of Applied Crystallography
Publication Type :
Academic Journal
Accession number :
159609703
Full Text :
https://doi.org/10.1107/S1600576722008068