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Simulation of diffusion in dense molecular systems on ARUZ – Massively-parallel FPGA-based machine.
- Source :
-
Computer Physics Communications . Feb2023, Vol. 283, pN.PAG-N.PAG. 1p. - Publication Year :
- 2023
-
Abstract
- In this paper, the implementation of a molecular diffusion model named Dynamic Lattice Liquid (DLL) is discussed. Two algorithms, sequential and parallel, implementing this model are examined. The presented theoretical considerations indicate some limitations of the sequential approach. The proposed parallel algorithm overcomes these limitations, but it requires dedicated hardware. An example of such hardware, the FPGA-based HPC system named ARUZ, is presented. [ABSTRACT FROM AUTHOR]
- Subjects :
- *PARALLEL algorithms
*PARALLEL programming
*MACHINERY
*DYNAMIC models
Subjects
Details
- Language :
- English
- ISSN :
- 00104655
- Volume :
- 283
- Database :
- Academic Search Index
- Journal :
- Computer Physics Communications
- Publication Type :
- Periodical
- Accession number :
- 160581355
- Full Text :
- https://doi.org/10.1016/j.cpc.2022.108591