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Genome Survey Sequencing of the Mole Cricket Gryllotalpa orientalis.
- Source :
-
Genes . Feb2023, Vol. 14 Issue 2, p255. 7p. - Publication Year :
- 2023
-
Abstract
- The mole cricket Gryllotalpa orientalis is an evolutionarily, medicinal, and agriculturally significant insect that inhabits underground environments and is distributed globally. This study measured genome size by flow cytometry and k-mer based on low-coverage sequencing, and nuclear repetitive elements were also identified. The haploid genome size estimate is 3.14 Gb by flow cytometry, 3.17 Gb, and 3.77 Gb-based two k-mer methods, respectively, which is well within the range previously reported for other species of the suborder Ensifera. 56% of repetitive elements were found in G. orientalis, similar to 56.83% in Locusta migratoria. However, the great size of repetitive sequences could not be annotated to specific repeat element families. For the repetitive elements that were annotated, Class I-LINE retrotransposon elements were the most common families and more abundant than satellite and Class I-LTR. These results based on the newly developed genome survey could be used in the taxonomic study and whole genome sequencing to improve the understanding of the biology of G. orientalis. [ABSTRACT FROM AUTHOR]
- Subjects :
- *GENOME size
*WHOLE genome sequencing
*MIGRATORY locust
*FLOW cytometry
*ORTHOPTERA
Subjects
Details
- Language :
- English
- ISSN :
- 20734425
- Volume :
- 14
- Issue :
- 2
- Database :
- Academic Search Index
- Journal :
- Genes
- Publication Type :
- Academic Journal
- Accession number :
- 162133298
- Full Text :
- https://doi.org/10.3390/genes14020255