Back to Search Start Over

Genome Survey Sequencing of the Mole Cricket Gryllotalpa orientalis.

Authors :
Sun, Kuo
Guan, De-Long
Huang, Hua-Teng
Xu, Sheng-Quan
Source :
Genes. Feb2023, Vol. 14 Issue 2, p255. 7p.
Publication Year :
2023

Abstract

The mole cricket Gryllotalpa orientalis is an evolutionarily, medicinal, and agriculturally significant insect that inhabits underground environments and is distributed globally. This study measured genome size by flow cytometry and k-mer based on low-coverage sequencing, and nuclear repetitive elements were also identified. The haploid genome size estimate is 3.14 Gb by flow cytometry, 3.17 Gb, and 3.77 Gb-based two k-mer methods, respectively, which is well within the range previously reported for other species of the suborder Ensifera. 56% of repetitive elements were found in G. orientalis, similar to 56.83% in Locusta migratoria. However, the great size of repetitive sequences could not be annotated to specific repeat element families. For the repetitive elements that were annotated, Class I-LINE retrotransposon elements were the most common families and more abundant than satellite and Class I-LTR. These results based on the newly developed genome survey could be used in the taxonomic study and whole genome sequencing to improve the understanding of the biology of G. orientalis. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20734425
Volume :
14
Issue :
2
Database :
Academic Search Index
Journal :
Genes
Publication Type :
Academic Journal
Accession number :
162133298
Full Text :
https://doi.org/10.3390/genes14020255