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Bioinformatics Analysis of WRKY Family Genes in Flax (Linum usitatissimum).

Authors :
An, Xia
Liu, Qin
Jiang, Hui
Dong, Guoyun
Tian, Danqing
Luo, Xiahong
Chen, Changli
Li, Wenlue
Liu, Tingting
Zou, Lina
Ying, Jinyao
Zhou, Huaping
Zhu, Xuan
Chen, Xiaoyan
Source :
Life (2075-1729). Jun2023, Vol. 13 Issue 6, p1258. 12p.
Publication Year :
2023

Abstract

WRKY gene family is one of the largest transcription factor families involved in various physiological processes of plants. Flax (Linum usitatissimum) is an important stem fiber crop, and it is also an economically important crop in natural fiber and textile industries around the world. In this study, 105 WRKY genes were obtained by screening the whole genome of flax. There were 26 in group I, 68 in group II, 8 in group III and 3 in group UN. The characteristics of the WRKY motif and gene structure in each group are similar. The promoter sequence of WRKY genes includes photoresponsive elements, core regulatory elements and 12 cis-acting elements under abiotic stress. Similar to A. thaliana and Compositae plants, WRKY genes are evenly distributed on each chromosome, with segmental and tandem repeated events, which play a major role in the evolution of WRKY genes. The flax WRKY gene family is mainly concentrated in group I and group II. This study is mainly based on genome-wide information to classify and analyze the flax WRKY gene family, laying a foundation for further understanding the role of WRKY transcription factors in species evolution and functional analysis. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
20751729
Volume :
13
Issue :
6
Database :
Academic Search Index
Journal :
Life (2075-1729)
Publication Type :
Academic Journal
Accession number :
164688009
Full Text :
https://doi.org/10.3390/life13061258