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Identification of ferroptosis-related genes in acute phase of temporal lobe epilepsy based on bioinformatic analysis.

Authors :
Chen, Shihao
Jin, Xing
He, Tao
Zhang, Mulan
Xu, Huiqin
Source :
BMC Genomics. 11/9/2023, Vol. 23 Issue 6, p1-9. 9p.
Publication Year :
2023

Abstract

Background: Epilepsy is a prevalent neurological disorder, and while its precise mechanism remains elusive, a connection to ferroptosis has been established. This study investigates the potential clinical diagnostic significance of ferroptosis-related genes (FRGs) during the acute phase of temporal lobe epilepsy. Methods: To identify differentially expressed genes (DEGs), we accessed data from the GEO database and performed an intersection analysis with the FerrDB database to pinpoint FRGs. A protein-protein interaction (PPI) network was constructed. To assess the diagnostic utility of the discovered feature genes for the disease, ROC curve analysis was conducted. Subsequently, qRT-PCR was employed to validate the expression levels of these feature genes. Results: This study identified a total of 25 FRGs. PPI network analysis revealed six feature genes: IL6, PTGS2, HMOX1, NFE2L2, TLR4, and JUN. ROC curve analysis demonstrated that the combination of these six feature genes exhibited the highest diagnostic potential. qRT-PCR validation confirmed the expression of these feature genes. Conclusion: We have identified six feature genes (IL6, PTGS2, HMOX1, NFE2L2, TLR4, and JUN) strongly associated with ferroptosis in epilepsy, suggesting their potential as biomarkers for the diagnosis of temporal lobe epilepsy. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
14712164
Volume :
23
Issue :
6
Database :
Academic Search Index
Journal :
BMC Genomics
Publication Type :
Academic Journal
Accession number :
173514941
Full Text :
https://doi.org/10.1186/s12864-023-09782-8