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Global diversity and inferred ecophysiology of microorganisms with the potential for dissimilatory sulfate/sulfite reduction.

Authors :
Diao, Muhe
Dyksma, Stefan
Koeksoy, Elif
Ngugi, David Kamanda
Anantharaman, Karthik
Loy, Alexander
Pester, Michael
Source :
FEMS Microbiology Reviews. Sep2023, Vol. 47 Issue 5, p1-18. 18p.
Publication Year :
2023

Abstract

Sulfate/sulfite-reducing microorganisms (SRM) are ubiquitous in nature, driving the global sulfur cycle. A hallmark of SRM is the dissimilatory sulfite reductase encoded by the genes dsrAB. Based on analysis of 950 mainly metagenome-derived dsrAB -carrying genomes, we redefine the global diversity of microorganisms with the potential for dissimilatory sulfate/sulfite reduction and uncover genetic repertoires that challenge earlier generalizations regarding their mode of energy metabolism. We show: (i) 19 out of 23 bacterial and 2 out of 4 archaeal phyla harbor uncharacterized SRM, (ii) four phyla including the Desulfobacterota harbor microorganisms with the genetic potential to switch between sulfate/sulfite reduction and sulfur oxidation, and (iii) the combination as well as presence/absence of different dsrAB- types , dsrL -types and dsrD provides guidance on the inferred direction of dissimilatory sulfur metabolism. We further provide an updated dsrAB database including > 60% taxonomically resolved, uncultured family-level lineages and recommendations on existing dsrAB -targeted primers for environmental surveys. Our work summarizes insights into the inferred ecophysiology of newly discovered SRM, puts SRM diversity into context of the major recent changes in bacterial and archaeal taxonomy, and provides an up-to-date framework to study SRM in a global context. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
01686445
Volume :
47
Issue :
5
Database :
Academic Search Index
Journal :
FEMS Microbiology Reviews
Publication Type :
Academic Journal
Accession number :
173587531
Full Text :
https://doi.org/10.1093/femsre/fuad058