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KINtaro: protein kinase-like database.

Authors :
Baranowski, Bartosz
Krysińska, Marianna
Gradowski, Marcin
Source :
BMC Research Notes. 2/16/2024, Vol. 17 Issue 1, p1-5. 5p.
Publication Year :
2024

Abstract

Objective: The superfamily of protein kinases features a common Protein Kinase-like (PKL) three-dimensional fold. Proteins with PKL structure can also possess enzymatic activities other than protein phosphorylation, such as AMPylation or glutamylation. PKL proteins play a vital role in the world of living organisms, contributing to the survival of pathogenic bacteria inside host cells, as well as being involved in carcinogenesis and neurological diseases in humans. The superfamily of PKL proteins is constantly growing. Therefore, it is crucial to gather new information about PKL families. Results: To this end, the KINtaro database (http://bioinfo.sggw.edu.pl/kintaro/) has been created as a resource for collecting and sharing such information. KINtaro combines protein sequence information and additional annotations for more than 70 PKL families, including 32 families not associated with PKL superfamily in established protein domain databases. KINtaro is searchable by keywords and by protein sequence and provides family descriptions, sequences, sequence alignments, HMM models, 3D structure models, experimental structures with PKL domain annotations and sequence logos with catalytic residue annotations. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
17560500
Volume :
17
Issue :
1
Database :
Academic Search Index
Journal :
BMC Research Notes
Publication Type :
Academic Journal
Accession number :
175528025
Full Text :
https://doi.org/10.1186/s13104-024-06713-y