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Efficient retrosynthetic planning with MCTS exploration enhanced A* search.

Authors :
Zhao, Dengwei
Tu, Shikui
Xu, Lei
Source :
Communications Chemistry. 3/7/2024, Vol. 7 Issue 1, p1-12. 12p.
Publication Year :
2024

Abstract

Retrosynthetic planning, which aims to identify synthetic pathways for target molecules from starting materials, is a fundamental problem in synthetic chemistry. Computer-aided retrosynthesis has made significant progress, in which heuristic search algorithms, including Monte Carlo Tree Search (MCTS) and A* search, have played a crucial role. However, unreliable guiding heuristics often cause search failure due to insufficient exploration. Conversely, excessive exploration also prevents the search from reaching the optimal solution. In this paper, MCTS exploration enhanced A* (MEEA*) search is proposed to incorporate the exploratory behavior of MCTS into A* by providing a look-ahead search. Path consistency is adopted as a regularization to improve the generalization performance of heuristics. Extensive experimental results on 10 molecule datasets demonstrate the effectiveness of MEEA*. Especially, on the widely used United States Patent and Trademark Office (USPTO) benchmark, MEEA* achieves a 100.0% success rate. Moreover, for natural products, MEEA* successfully identifies bio-retrosynthetic pathways for 97.68% test compounds. Computer-aided retrosynthetic planning algorithms such as Monte Carlo Tree Search (MCTS) and A* search can expedite the identification of synthetic pathways, however, achieving a high success rate remains challenging. Here, the authors develop an enhanced search algorithm by incorporating the exploration capability of MCTS into A* search, achieving synthesis success rates of up to 100%. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
23993669
Volume :
7
Issue :
1
Database :
Academic Search Index
Journal :
Communications Chemistry
Publication Type :
Academic Journal
Accession number :
175931258
Full Text :
https://doi.org/10.1038/s42004-024-01133-2