Back to Search Start Over

Identification and validation of an immunotherapeutic signature for colon cancer based on the regulatory patterns of ferroptosis and their association with the tumor microenvironment.

Authors :
Liu, Yong
Zhao, Junzhang
Huang, Baoxiang
Liang, Youcheng
Jiang, Guanming
Zhou, Xinglin
Chen, Yilin
He, Tao
Zheng, Mingbin
Huang, Zunnan
Source :
BBA - Molecular Cell Research. Apr2024, Vol. 1871 Issue 4, pN.PAG-N.PAG. 1p.
Publication Year :
2024

Abstract

The integrated landscape of ferroptosis regulatory patterns and their association with colon microenvironment have been demonstrated in recent studies. However, the ferroptosis-related immunotherapeutic signature for colon cancer (CC) remains unclear. We comprehensively evaluated 1623 CC samples, identified patterns of ferroptosis modification based on ferroptosis-associated genes, and systematically correlated these patterns with tumor microenvironment (TME) cell infiltration characteristics. In addition, the ferroptosis-regulated gene score (FRG-score) was constructed to quantify the pattern of ferroptosis alterations in individual tumors. Three distinct patterns of ferroptosis modification were identified, including antioxidant defense, iron toxicity, and lipid peroxidation. The characteristics of TME cell infiltration under these three patterns were highly consistent with the three immune phenotypes of tumors, including immune-inflamed, immune-excluded and immune-desert phenotypes. We also demonstrated that evaluation of ferroptosis regulatory patterns within individual tumors can predict tumor inflammatory status, tumor subtype, TME stromal activity, genetic variation, and clinical outcome. Immunotherapy cohorts confirmed that patients with low FRG-scores showed remarkable therapeutic and clinical benefits. Furthermore, the hub gene apolipoprotein L6 (APOL6), a drug-sensitive target associated with cancer cell ferroptosis, was identified through our proposed novel key gene screening process and validated in CC cell lines and scRNA-seq. • This work investigated the integrated landscape of ferroptosis regulation patterns and their association with TME. • The characteristics of TME cell infiltration under identified three patterns were in accord well with three immune phenotypes of tumors. • FRG-score quantified ferroptosis modification patterns and predicted clinical response to immunotherapy and prognosis well. • The procedures for screening key genes were developed and APOL6 was preliminarily identified as a promising target in CC. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
01674889
Volume :
1871
Issue :
4
Database :
Academic Search Index
Journal :
BBA - Molecular Cell Research
Publication Type :
Academic Journal
Accession number :
176502428
Full Text :
https://doi.org/10.1016/j.bbamcr.2024.119698