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Description of Navicula vanseea sp. nov. (Naviculales, Naviculaceae), a new species of diatom from the highly alkaline Lake Van (Republic of Türkiye) with complete characterisation of its organellar genomes and multigene phylogeny.

Authors :
Yılmaz, Elif
Mann, David G.
Gastineau, Romain
Trobajo, Rosa
Solak, Cüneyt Nadir
Górecka, Ewa
Turmel, Monique
Lemieux, Claude
Ertorun, Nesil
Witkowski, Andrzej
Source :
PhytoKeys. 2024, Issue 241, p27-48. 22p.
Publication Year :
2024

Abstract

The current article describes Navicula vanseea sp. nov., a new species of diatom from Lake Van, a highly alkaline lake in Eastern Anatolia (Türkiye). The description is based on light and scanning electron microscopy performed on two monoclonal cultures. The complete nuclear rRNA clusters and plastid genomes have been sequenced for these two strains and the complete mitogenome for one of them. The plastome of both strains shows the probable loss of a functional ycf35 gene. They also exhibit two IB4 group I introns in their rrl, each encoding for a putative LAGLIDADG homing endonuclease, with the first L1917 IB4 intron reported amongst diatoms. The Maximum Likelihood phylogeny inferred from a concatenated alignment of 18S, rbcL and psbC distinguishes N. vanseea sp. nov. from the morphologically similar species Navicula cincta and Navicula microdigitoradiata. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13142011
Issue :
241
Database :
Academic Search Index
Journal :
PhytoKeys
Publication Type :
Academic Journal
Accession number :
177581330
Full Text :
https://doi.org/10.3897/phytokeys.241.118903