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Estimating Trans-Ancestry Genetic Correlation with Unbalanced Data Resources.

Authors :
Zhao, Bingxin
Yang, Xiaochen
Zhu, Hongtu
Source :
Journal of the American Statistical Association. Jun2024, Vol. 119 Issue 546, p839-850. 12p.
Publication Year :
2024

Abstract

The aim of this article is to propose a novel method for estimating trans-ancestry genetic correlations in genome-wide association studies (GWAS) using genetically predicted observations. These correlations describe how genetic architecture of complex traits varies among populations. Our new estimator corrects for biases arising from prediction errors in high-dimensional weak GWAS signals, while addressing the ethnic diversity inherent in GWAS data, such as linkage disequilibrium (LD) differences. A distinguishing feature of our approach is its flexibility regarding sample sizes: it necessitates a large GWAS sample only from one population, while the secondary population may have a much smaller cohort, even in the hundreds. This design directly addresses the existing imbalance in GWAS data resources, where datasets for European populations typically outnumber those of non-European ancestries. Through extensive simulations and real data analysis from the UK Biobank study encompassing 26 complex traits, we validate the reliability of our method. Our results illuminate the broader implications of transferring genetic findings across diverse populations. for this article are available online, including a standardized description of the materials available for reproducing the work. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
01621459
Volume :
119
Issue :
546
Database :
Academic Search Index
Journal :
Journal of the American Statistical Association
Publication Type :
Academic Journal
Accession number :
178134088
Full Text :
https://doi.org/10.1080/01621459.2024.2344703