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Exploring the role of non‐canonical splice site variants in aberrant splicing associated with reproductive genetic disorders.

Authors :
Zhou, Ling
Yang, Min
Mei, Mei
Mai, Zhuoyao
Li, Xiaojuan
Deng, Kewen
Chen, Shiyi
Lin, Siyuan
Li, Yinshi
Jiang, Weilun
Chen, Hui
He, Zuyong
Yuan, Ping
Source :
Clinical Genetics. Aug2024, p1. 7p. 3 Illustrations.
Publication Year :
2024

Abstract

Whole‐exome sequencing (WES) is frequently utilized in diagnosing reproductive genetic disorders to identify various genetic variants. Canonical ±1,2 splice sites are typically considered highly pathogenic, while variants at the 5′ or 3′ ends of exon boundaries are often considered synonymous or missense variants, with their potential impact on abnormal gene splicing frequently overlooked. In this study, we identified five variants located at the last two bases of the exons and two canonical splicing variants in five distinct families affected by reproductive genetic disorders through WES. Minigene analysis, RT‐PCR and Quantitative Real‐time PCR (RT‐qPCR) confirmed that all seven variants induced aberrant splicing, with six variants altering gene transcriptional expression levels. These findings underscore the crucial role of splice variants, particularly non‐canonical splice sites variants, in reproductive genetic disorders, with all identified variants classified as pathogenic. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00099163
Database :
Academic Search Index
Journal :
Clinical Genetics
Publication Type :
Academic Journal
Accession number :
178829560
Full Text :
https://doi.org/10.1111/cge.14604