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Role and timing of GTP binding and hydrolysis during EF-G-dependent tRNA translocation on the ribosome.

Authors :
Wilden, Berthold
Savelsbergh, Andreas
Rodnina, Marina V.
Wintermeyer, Wolfgang
Source :
Proceedings of the National Academy of Sciences of the United States of America. 9/12/2006, Vol. 103 Issue 37, p13670-13675. 6p. 1 Chart, 4 Graphs.
Publication Year :
2006

Abstract

The translocation of tRNA and mRNA through the ribosome is promoted by elongation factor G (EF-G), a GTPase that hydrolyzes GTP during the reaction. Recently, it was reported that, in contrast to previous observations, the affinity of EF-G was much weaker for GTP than for GDP and that ribosome-catalyzed GDP-GTP exchange would be required for translocation [Zavialov AV, Hauryliuk VV, Ehrenberg M (2005) J Biol 4:9]. We have reinvestigated GTP/GDP binding and show that EF-G binds GTP and GDP with affinities in the 20 to 40 μM range (37°C), in accordance with earlier reports. Furthermore, GDP exchange, which is extremely rapid on unbound EF-G, is retarded, rather than accelerated, on the ribosome, which, therefore, is not a nucleotide-exchange factor for EF-G. The EF- GGDPNP complex, which is very labile, is stabilized 30,000-fold by binding to the ribosome. These findings, together with earlier kinetic results, reveal that EF-G enters the pretranslocation ribosome in the GTP-bound form and indicate that, upon ribosome- complex formation, the nucleotide-binding pocket of EF-G is closed, presumably in conjunction with GTPase activation. GTP hydrolysis is required for rapid tRNA-mRNA movement, and Pi release induces further rearrangements of both EF-G and the ribosome that are required for EF-G turnover. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00278424
Volume :
103
Issue :
37
Database :
Academic Search Index
Journal :
Proceedings of the National Academy of Sciences of the United States of America
Publication Type :
Academic Journal
Accession number :
22540444
Full Text :
https://doi.org/10.1073/pnas.0606099103