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Packing and loop-structure variations in non-isomorphous crystals of FabZ from Plasmodium falciparum.

Authors :
Swarnamukhi, Pidugu Lakshmi
Sharma, Shailendra Kumar
Padala, Prasanth
Surolia, Namita
Surolia, Avadhesha
Suguna, Kaza
Source :
Acta Crystallographica: Section D (Wiley-Blackwell). Apr2007, Vol. 63 Issue 4, p458-464. 7p. 2 Diagrams, 3 Charts.
Publication Year :
2007

Abstract

The crystals obtained from various batches of crystallization trials of FabZ from Plasmodium falciparum exhibited non-isomorphism. The c axis of the I222 cell showed a large variation of about 16 Å, from c = 81 Å to c = 97 Å. Complete data sets were collected for three crystal forms with varying lengths of the c axis (form 1, c = 97 Å; form 2, c = 92 Å; form 3, c = 81 Å). The crystal structure of form 1 has been reported previously. Here, the crystal structures of the other two crystal forms are reported and a detailed structural comparison is made of the three crystal forms in order to explore the possible reasons for the existence of non-isomorphism. The conformations of three loops vary between the three crystal forms. The disposition of the loops affects the crystal packing and hence the unit-cell parameter. The crystallization condition and crystallization method employed, which change the evaporation rate, determine the crystal form of the enzyme. The present analysis shows that pH-induced intrinsic conformational changes in the protein play a key role in the observed differences. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
09074449
Volume :
63
Issue :
4
Database :
Academic Search Index
Journal :
Acta Crystallographica: Section D (Wiley-Blackwell)
Publication Type :
Academic Journal
Accession number :
24458061
Full Text :
https://doi.org/10.1107/S0907444907003228