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Thermal fluctuations of DNA enclosed by glycerol–water glassy matrices: an elastic neutron scattering investigation.

Authors :
Cornicchi, E.
Capponi, S.
Marconi, M.
Onori, G.
Paciaroni, A.
Source :
European Biophysics Journal. Jun2008, Vol. 37 Issue 5, p583-590. 8p. 1 Chart, 5 Graphs.
Publication Year :
2008

Abstract

Through elastic neutron scattering measurements, we investigated the thermal fluctuations of DNA enclosed by glycerol–water glassy matrices, at different levels of hydration, over the wide temperature range from 20 to 300 K. For all the samples, the extracted hydrogen mean square displacements (MSD) show a purely vibrational harmonic trend at very low temperatures, and a first onset of anharmonic dynamics above ∼100 K. Such onset is consistent with the activation of DNA methyl group rotational motions. Then, at a certain temperature T d, the MSD show a second onset of anharmonicity, which corresponds to the DNA dynamical transition. The T d values vary as a function of the hydration degree of the environment. The crucial role of the solvent mobility to activate the DNA thermal fluctuations is proposed, together with a preferential hydration effect of the DNA phosphate groups. Finally, a comparison between the average mobility of homologous samples of DNA and the lysozyme protein is considered. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
01757571
Volume :
37
Issue :
5
Database :
Academic Search Index
Journal :
European Biophysics Journal
Publication Type :
Academic Journal
Accession number :
32587206
Full Text :
https://doi.org/10.1007/s00249-008-0268-1