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ParaSAM: a parallelized version of the significance analysis of microarrays algorithm.

Authors :
Sharma, Ashok
Jieping Zhao
Podolsky, Robert
McIndoe, Richard A.
Source :
Bioinformatics. Jun2010, Vol. 26 Issue 11, p1465-1467. 3p. 1 Chart, 1 Graph.
Publication Year :
2010

Abstract

Motivation: Significance analysis of microarrays (SAM) is a widely used permutation-based approach to identifying differentially expressed genes in microarray datasets. While SAM is freely available as an Excel plug-in and as an R-package, analyses are often limited for large datasets due to very high memory requirements. [ABSTRACT FROM PUBLISHER]

Details

Language :
English
ISSN :
13674803
Volume :
26
Issue :
11
Database :
Academic Search Index
Journal :
Bioinformatics
Publication Type :
Academic Journal
Accession number :
50641122
Full Text :
https://doi.org/10.1093/bioinformatics/btq161