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Spectroscopic identification of reactive porphyrin motions.

Authors :
Barabanschikov, Alexander
Demidov, Alexander
Kubo, Minoru
Champion, Paul M.
Sage, J. Timothy
Zhao, Jiyong
Sturhahn, Wolfgang
Alp, E. Ercan
Source :
Journal of Chemical Physics. 7/7/2011, Vol. 135 Issue 1, p015101. 16p.
Publication Year :
2011

Abstract

Nuclear resonance vibrational spectroscopy (NRVS) reveals the vibrational dynamics of a Mössbauer probe nucleus. Here, 57Fe NRVS measurements yield the complete spectrum of Fe vibrations in halide complexes of iron porphyrins. Iron porphine serves as a useful symmetric model for the more complex spectrum of asymmetric heme molecules that contribute to numerous essential biological processes. Quantitative comparison with the vibrational density of states (VDOS) predicted for the Fe atom by density functional theory calculations unambiguously identifies the correct sextet ground state in each case. These experimentally authenticated calculations then provide detailed normal mode descriptions for each observed vibration. All Fe-ligand vibrations are clearly identified despite the high symmetry of the Fe environment. Low frequency molecular distortions and acoustic lattice modes also contribute to the experimental signal. Correlation matrices compare vibrations between different molecules and yield a detailed picture of how heme vibrations evolve in response to (a) halide binding and (b) asymmetric placement of porphyrin side chains. The side chains strongly influence the energetics of heme doming motions that control Fe reactivity, which are easily observed in the experimental signal. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00219606
Volume :
135
Issue :
1
Database :
Academic Search Index
Journal :
Journal of Chemical Physics
Publication Type :
Academic Journal
Accession number :
62311766
Full Text :
https://doi.org/10.1063/1.3598473