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HiTC: exploration of high-throughput ‘C’ experiments.

Authors :
Servant, Nicolas
Lajoie, Bryan R.
Nora, Elphège P.
Giorgetti, Luca
Chen, Chong-Jian
Heard, Edith
Dekker, Job
Barillot, Emmanuel
Source :
Bioinformatics. Nov2012, Vol. 28 Issue 21, p2843-2844. 2p.
Publication Year :
2012

Abstract

Summary: The R/Bioconductor package HiTC facilitates the exploration of high-throughput 3C-based data. It allows users to import and export ‘C’ data, to transform, normalize, annotate and visualize interaction maps. The package operates within the Bioconductor framework and thus offers new opportunities for future development in this field.Availability and implementation: The R package HiTC is available from the Bioconductor website. A detailed vignette provides additional documentation and help for using the package.Contact: nicolas.servant@curie.frSupplementary information: Supplementary data are available at Bioinformatics online. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
13674803
Volume :
28
Issue :
21
Database :
Academic Search Index
Journal :
Bioinformatics
Publication Type :
Academic Journal
Accession number :
82772072
Full Text :
https://doi.org/10.1093/bioinformatics/bts521