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Dynamics of polymer translocation through a nanopore induced by different sizes of crowding agents.

Authors :
Chen, Yuhao
Luo, Kaifu
Source :
Journal of Chemical Physics. May2013, Vol. 138 Issue 20, p204903. 8p. 1 Color Photograph, 7 Graphs.
Publication Year :
2013

Abstract

Using both theoretical analysis and Langevin dynamics simulations in two dimensions, we investigate the dynamics of polymer translocation through a nanopore induced by different sizes of the mobile crowding agents, where the crowding agents have equal area fraction [lowercase_phi_synonym] and their diameters are σ and σb >= σ at cis and trans sides, respectively. The chain prefers moving to the side with bigger crowding agents as expected, however, we find the size difference between crowding agents plays a complicated role in the probability of polymer translocation from cis to trans side, the translocation time τ and its distribution, and the translocation exponent. In particular, with increasing σb, the translocation probability shows a maximum value and τ has a minimum value. These results can be interpreted by the effective driving force, which always increases with increasing [lowercase_phi_synonym] but has a maximum value with increasing σb. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
00219606
Volume :
138
Issue :
20
Database :
Academic Search Index
Journal :
Journal of Chemical Physics
Publication Type :
Academic Journal
Accession number :
87925448
Full Text :
https://doi.org/10.1063/1.4807088