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Predicting Network Activity from High Throughput Metabolomics.

Authors :
Li, Shuzhao
Park, Youngja
Duraisingham, Sai
Strobel, Frederick H.
Khan, Nooruddin
Soltow, Quinlyn A.
Jones, Dean P.
Pulendran, Bali
Source :
PLoS Computational Biology. Jul2013, Vol. 9 Issue 7, p1-11. 11p.
Publication Year :
2013

Abstract

The functional interpretation of high throughput metabolomics by mass spectrometry is hindered by the identification of metabolites, a tedious and challenging task. We present a set of computational algorithms which, by leveraging the collective power of metabolic pathways and networks, predict functional activity directly from spectral feature tables without a priori identification of metabolites. The algorithms were experimentally validated on the activation of innate immune cells. [ABSTRACT FROM AUTHOR]

Details

Language :
English
ISSN :
1553734X
Volume :
9
Issue :
7
Database :
Academic Search Index
Journal :
PLoS Computational Biology
Publication Type :
Academic Journal
Accession number :
89626406
Full Text :
https://doi.org/10.1371/journal.pcbi.1003123