Novel branch patterns and anticoagulant activity of glycosaminoglycan from sea cucumber Apostichopus japonicus.

A novel glucosidic pattern of fucose branches was found in the glycosaminoglycan from the sea cucumber Apostichopus japonicus in China. The methylation of desulfated/carboxyl-reduced polysaccharides and analysis of unsaturated disaccharides generated from the enzymolysis of the defucosed polysaccharides demonstrated that the branch is formed by one fucopyranosyl residue, 46.5% of which is linked through the O-3 position of β- d -glucuronic acid, while 8.7% and 43.9% are linked through the O-6 and O-4 positions of the N -acetylgalactosamine moiety. The β- d -glucuronic acid, N -acetyl-β- d -galactosamine, α- l -fucose and sulfate ester with the molecular ratio of 0.97:1.00:1.13:3.85 composed the backbone →4)GlcUAβ(1 → 3)GalNAcβ(1→ and sulfated fucose branches. The sulfation patterns of fucose branches and the linkage pattern of the backbone structure were determined by 1/2 dimension NMR. The most abundant branch species were 2,4-di- O -sulfated and 3,4-di- O -sulfated fucose, but 4-mono- O -sulfated residue was also present. The structure of presently obtained glycosaminoglycan is different from that previously obtained from Stichopus japonicus (Kariya et al., Carbohyd. Res. 297 (1997) 273–279), which suggests that the structures of glycosaminoglycans from the same species of different regions somehow differ. The anticoagulant assay indicated that the polysaccharide possessed a high anticoagulant activity and the sulfated fucose branches were essential to the activity. [ABSTRACT FROM AUTHOR]