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Genomic localization of the human genes TAF1A, TAF1B and TAF1C, encoding TAF(I)48, TAF(I)63 and TAF(I)110 subunits of class I general transcription initiation factor SL1.
- Source :
-
Cytogenetics and cell genetics [Cytogenet Cell Genet] 2000; Vol. 89 (1-2), pp. 133-6. - Publication Year :
- 2000
-
Abstract
- Human SL1 is a general transcription initiation factor (GTF) essential for RNA polymerase I to start rRNA synthesis at class I promoters. It is comprised of the TATA box-binding protein (TBP) and three TBP-associated factors (TAF(I)48, TAF(I)63 and TAF(I)110). We have determined that the human genes TAF1A, TAF1B and TAF1C, encoding these three TAF(I) polypeptides, are localized at lq42, 2p25 and 16q24, respectively. All three genes are present as single copies in the human genome and map to different chromosomes, as shown by somatic cell hybrid panel and radiation hybrid panel analysis and FISH. Two of these genes, TAF1C and TAF1B, are transcribed into multiple RNAs, as determined through Northern analysis of mRNA from various human organs and cell lines. If translated into different polypeptides, this could result in production of variant isoforms of SL1 with different activation potentials.<br /> (Copyright 2000 S. Karger AG, Basel.)
- Subjects :
- Alleles
Chromosomes, Human, Pair 1 genetics
Chromosomes, Human, Pair 16 genetics
Chromosomes, Human, Pair 2 genetics
DNA-Binding Proteins chemistry
Genetic Linkage genetics
Humans
Hybrid Cells
In Situ Hybridization, Fluorescence
Polymorphism, Restriction Fragment Length
Protein Isoforms genetics
RNA, Messenger analysis
RNA, Messenger genetics
Transcription Factors chemistry
Tumor Cells, Cultured
DNA-Binding Proteins genetics
Physical Chromosome Mapping
Pol1 Transcription Initiation Complex Proteins
TATA-Binding Protein Associated Factors
Transcription Factor TFIID
Transcription Factors genetics
Subjects
Details
- Language :
- English
- ISSN :
- 0301-0171
- Volume :
- 89
- Issue :
- 1-2
- Database :
- MEDLINE
- Journal :
- Cytogenetics and cell genetics
- Publication Type :
- Academic Journal
- Accession number :
- 10894955
- Full Text :
- https://doi.org/10.1159/000015592