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Substitutions in the conserved C2C domain of otoferlin cause DFNB9, a form of nonsyndromic autosomal recessive deafness.
Substitutions in the conserved C2C domain of otoferlin cause DFNB9, a form of nonsyndromic autosomal recessive deafness.
- Source :
-
Neurobiology of disease [Neurobiol Dis] 2002 Jul; Vol. 10 (2), pp. 157-64. - Publication Year :
- 2002
-
Abstract
- DFNB, the nonsyndromic hearing loss with an autosomal recessive mode of inheritance constitutes the majority of severe to profound prelingual forms of hearing impairment, usually leading to inability of speech acquisition. We analyzed a consanguineous family with autosomal recessive deafness which has been shown to segregate within chromosomal region 2p23.1 (DFNB9; MIM 601071). By SSCP analysis and DNA sequencing of the 48 exons of the DFNB9 gene, coding for otoferlin, previously reported mutations in OTOF were excluded. Next to a frequent T > C single nucleotide polymorphism in exon 8, two novel mutations linked in exon 15 of the OTOF long splice form were identified comprising substitutions at positions 490 (Pro > Gln) and 515 (Ile > Thr), both located in the conserved Ca(2+) binding C2C domain of this peptide. Comparisons of homology using human and mice otoferlins and closely related peptides and computer simulation analyses suggest that changes in the mutated segment's secondary structure affect the Ca(2+) binding capacity of the C2C domain in otoferlin.
- Subjects :
- Alternative Splicing
Amino Acid Sequence
Animals
Binding Sites
Chromosomes, Human, Pair 2 genetics
Consanguinity
DNA Mutational Analysis
Exons genetics
Female
Germany
Humans
Male
Membrane Proteins chemistry
Membrane Proteins metabolism
Mice
Molecular Sequence Data
Nerve Tissue Proteins chemistry
Nerve Tissue Proteins metabolism
Pedigree
Polymorphism, Single Nucleotide
Protein Isoforms chemistry
Protein Isoforms metabolism
Protein Processing, Post-Translational
Protein Structure, Secondary
Protein Structure, Tertiary
RNA Splice Sites genetics
Sequence Alignment
Sequence Homology, Amino Acid
Species Specificity
Turkey ethnology
Amino Acid Substitution
Calcium metabolism
Deafness genetics
Genes, Recessive
Membrane Proteins genetics
Mutation, Missense
Nerve Tissue Proteins genetics
Protein Isoforms genetics
Subjects
Details
- Language :
- English
- ISSN :
- 0969-9961
- Volume :
- 10
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Neurobiology of disease
- Publication Type :
- Academic Journal
- Accession number :
- 12127154
- Full Text :
- https://doi.org/10.1006/nbdi.2002.0488