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MHCPred: bringing a quantitative dimension to the online prediction of MHC binding.
- Source :
-
Applied bioinformatics [Appl Bioinformatics] 2003; Vol. 2 (1), pp. 63-6. - Publication Year :
- 2003
-
Abstract
- The accurate prediction of T cell epitopes is one of the key aspirations of immunoinformatics. We have developed a partial least squares-based, robust multivariate statistical method for the quantitative prediction of peptide binding to major histocompatibility complexes (MHCs), the principal checkpoint on the antigen presentation pathway. As a service to the immunobiology community, we have made a Perl implementation of the method available as a World Wide Web server.
- Subjects :
- Algorithms
Antigen Presentation
Binding Sites
Computer Simulation
Epitopes, T-Lymphocyte chemistry
Epitopes, T-Lymphocyte immunology
Histocompatibility Antigens immunology
Models, Chemical
Models, Molecular
Online Systems
Peptides immunology
Protein Binding
Histocompatibility Antigens chemistry
Internet
Major Histocompatibility Complex
Peptides chemistry
Sequence Analysis, Protein methods
Software
User-Computer Interface
Subjects
Details
- Language :
- English
- ISSN :
- 1175-5636
- Volume :
- 2
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Applied bioinformatics
- Publication Type :
- Academic Journal
- Accession number :
- 15130834