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Identification of the 'NORE' (N-Oct-3 responsive element), a novel structural motif and composite element.
- Source :
-
Nucleic acids research [Nucleic Acids Res] 2005 Mar 14; Vol. 33 (5), pp. 1513-23. Date of Electronic Publication: 2005 Mar 14 (Print Publication: 2005). - Publication Year :
- 2005
-
Abstract
- N-Oct-3 is a neuronal transcription factor widely expressed in the developing mammalian central nervous system, and necessary to maintain neural cell differentiation. The key role of N-Oct-3 in the transcriptional regulation of a multiplicity of genes is primarily due to the structural plasticity of its so-called 'POU' (acronym of Pit, Oct, Unc) DNA-binding domain. We have recently reported about the unusual dual neuro-specific transcriptional regulation displayed by N-Oct-3 [Blaud,M., Vossen,C., Joseph,G., Alazard,R., Erard,M. and Nieto,L. (2004) J. Mol. Biol., 339, 1049-1058]. To elucidate the underlying molecular mechanisms, we have now made use of molecular modeling, DNA footprinting and electrophoretic mobility shift assay techniques. This combined approach has allowed us to uncover a novel mode of homodimerization adopted by the N-Oct-3 POU domain bound to the neuronal aromatic amino acids de-carboxylase and corticotropin-releasing hormone gene promoters and to demonstrate that this pattern is induced by a structural motif that we have termed 'NORE' (N-Oct-3 responsive element), comprising the 14 bp sequence element TNNRTAAATAATRN. In addition, we have been able to explain how the same structural motif can also induce the formation of a heterodimer in association with hepatocyte nuclear factor 3beta(/Forkhead box a2). Finally, we discuss the possible role of the NORE motif in relation to neuroendocrine lung tumor formation, and in particular the development of small cell lung cancer.
- Subjects :
- Amino Acid Motifs
Animals
Aromatic-L-Amino-Acid Decarboxylases genetics
Base Sequence
Binding Sites
Carcinoma, Small Cell genetics
Corticotropin-Releasing Hormone genetics
DNA Footprinting
DNA-Binding Proteins metabolism
Dimerization
Hepatocyte Nuclear Factor 3-beta
Humans
Lung Neoplasms genetics
Models, Molecular
Nuclear Proteins chemistry
Nuclear Proteins metabolism
Octamer Transcription Factor-3
Promoter Regions, Genetic
Protein Structure, Tertiary
Rats
Transcription Factors metabolism
DNA-Binding Proteins chemistry
Neurons metabolism
Response Elements
Transcription Factors chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1362-4962
- Volume :
- 33
- Issue :
- 5
- Database :
- MEDLINE
- Journal :
- Nucleic acids research
- Publication Type :
- Academic Journal
- Accession number :
- 15767276
- Full Text :
- https://doi.org/10.1093/nar/gki284