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Polyphasic analysis of Thermus isolates from geothermal areas in Iceland.
- Source :
-
Extremophiles : life under extreme conditions [Extremophiles] 2006 Dec; Vol. 10 (6), pp. 563-75. Date of Electronic Publication: 2006 Jun 24. - Publication Year :
- 2006
-
Abstract
- Genetic relationships and diversity of 101 Thermus isolates from different geothermal regions in Iceland were investigated by using multilocus enzyme electrophoresis (MLEE) and small subunit ribosomal rRNA (SSU rRNA) sequence analysis. Ten polymorphic enzymes were used and seven distinct and genetically highly divergent lineages of Thermus were observed. Six of seven lineages could be assigned to species whose names have been validated. The most diverse lineage was Thermus scotoductus. In contrast to the other lineages, this lineage was divided into very distinct genetic sublineages that may represent subspecies with different habitat preferences. The least diverse lineage was Thermus brockianus. Phenotypic and physiological analysis was carried out on a subset of the isolates. No relationship was found between growth on specific single carbon source to the grouping obtained by the isoenzyme analysis. The response to various salts was distinguishing in a few cases. No relationship was found between temperature at the isolation site and the different lineages, but pH indicated a relation to specific lineages.
- Subjects :
- Adaptation, Physiological
Bacterial Proteins analysis
Biodiversity
DNA, Bacterial analysis
Databases, Genetic
Electrophoresis, Polyacrylamide Gel
Enzymes analysis
Evolution, Molecular
Genotype
Hydrogen-Ion Concentration
Iceland
Oxidation-Reduction
Phenotype
Phylogeny
RNA, Ribosomal genetics
Ribotyping
Sequence Analysis, DNA
Sequence Homology, Nucleic Acid
Sodium Chloride metabolism
Temperature
Thermus enzymology
Thermus genetics
Thermus growth & development
Thermus isolation & purification
Thermus metabolism
Thermus thermophilus classification
Thiosulfates metabolism
Bacterial Typing Techniques
Hot Springs microbiology
Thermus classification
Water Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1431-0651
- Volume :
- 10
- Issue :
- 6
- Database :
- MEDLINE
- Journal :
- Extremophiles : life under extreme conditions
- Publication Type :
- Academic Journal
- Accession number :
- 16799746
- Full Text :
- https://doi.org/10.1007/s00792-006-0530-3