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Effects of temperature on the diversity and community structure of known methanogenic groups and other archaea in high Arctic peat.
- Source :
-
The ISME journal [ISME J] 2008 Jan; Vol. 2 (1), pp. 37-48. Date of Electronic Publication: 2007 Nov 22. - Publication Year :
- 2008
-
Abstract
- Archaeal populations are abundant in cold and temperate environments, but little is known about their potential response to climate change-induced temperature changes. The effects of temperature on archaeal communities in unamended slurries of weakly acidic peat from Spitsbergen were studied using a combination of fluorescent in situ hybridization (FISH), 16S rRNA gene clone libraries and denaturing gradient gel electrophoresis (DGGE). A high relative abundance of active archaeal cells (11-12% of total count) was seen at low temperatures (1 and 5 degrees C), and this community was dominated by Group 1.3b Crenarchaeota and the euryarchaeal clusters rice cluster V (RC-V), and Lake Dagow sediment (LDS). Increasing temperature reduced the diversity and relative abundance of these clusters. The methanogenic community in the slurries was diverse and included representatives of Methanomicrobiales, Methanobacterium, Methanosarcina and Methanosaeta. The overall relative abundance and diversity of the methanogenic archaea increased with increasing temperature, in accordance with a strong stimulation of methane production rates. However, DGGE profiling showed that the structure of this community changed with temperature and time. While the relative abundance of some populations was affected directly by temperature, the relative abundance of other populations was controlled by indirect effects or did not respond to temperature.
- Subjects :
- Archaea isolation & purification
Arctic Regions
DNA, Archaeal genetics
Gene Library
In Situ Hybridization, Fluorescence
Methanobacterium classification
Methanobacterium genetics
Methanobacterium isolation & purification
Methanomicrobiales classification
Methanomicrobiales genetics
Methanomicrobiales isolation & purification
Methanosarcinaceae classification
Methanosarcinaceae genetics
Methanosarcinaceae isolation & purification
Molecular Sequence Data
Phylogeny
Polymerase Chain Reaction
RNA, Ribosomal, 16S classification
RNA, Ribosomal, 16S genetics
Svalbard
Temperature
Archaea classification
Archaea genetics
Methane metabolism
Soil Microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1751-7362
- Volume :
- 2
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- The ISME journal
- Publication Type :
- Academic Journal
- Accession number :
- 18180745
- Full Text :
- https://doi.org/10.1038/ismej.2007.84