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Lipolytic activity of chromoblastomycosis agents measured by infrared spectroscopy and chemometric methods.
- Source :
-
Medical mycology [Med Mycol] 2009 Feb; Vol. 47 (1), pp. 63-9. Date of Electronic Publication: 2008 Dec 18. - Publication Year :
- 2009
-
Abstract
- The lipase activity of nine strains of six chromoblastomycosis agents (Fonsecaea pedrosoi, Phialophora verrucosa, Cladophialophora bantianum, Cladophialophora carrionii, Rhinocladiela aquaspersa and Exophiala jeanselmei) grown on solid medium was investigated using Fourier transform infrared spectroscopy and hierarchical clustering analysis. The data was quantified by p-nitrophenyl palmitate assay using partial least squares (PLS) regression. These methods allowed the correlation of six genera and species within the 1230-1650 and 2800+3000 cm(-1) spectral ranges among strains grown for 14 days from their respective lipolytic activity with RMSEV=0.048 and R2val=0.95 and ten latent variables. The lipolytic activity also was predicted using PLS models with 1230-1650 and 2800-3000 cm(-1) and 900-1450 cm(-1) spectral ranges for strains grown for 21 days. The separate analysis of F. pedrosoi strains yielded a prediction model for biomass at 21 days with RMSEV=0.065 and R2val=0.95 with eight latent variables using (1100-1300)+(1330-1460)+(1550-1650) cm(-1) spectral regions The best model obtained with the clustering of P. verrucosa, C. bantianum, C. carrionii, R. aquaspersa and E. jeanselmei strains was constructed with the same spectral ranges, but with RMSEV=0.074 and R2val=0.94 and ten latent variables. Infrared spectroscopy is suitable for the quantitation of extracellular lipase activity linked to the biomass of chromoblastomycosis agents.
- Subjects :
- Ascomycota classification
Ascomycota growth & development
Biomass
Cluster Analysis
Culture Media
Fungal Proteins metabolism
Humans
Phialophora growth & development
Ascomycota enzymology
Chromoblastomycosis microbiology
Lipase metabolism
Phialophora enzymology
Spectroscopy, Fourier Transform Infrared methods
Subjects
Details
- Language :
- English
- ISSN :
- 1369-3786
- Volume :
- 47
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Medical mycology
- Publication Type :
- Academic Journal
- Accession number :
- 19101839
- Full Text :
- https://doi.org/10.1080/13693780802566325