Payao: a community platform for SBML pathway model curation.

Authors :: Matsuoka Y
Ghosh S
Kikuchi N
Kitano H
Source :: Bioinformatics (Oxford, England) [Bioinformatics] 2010 May 15; Vol. 26 (10), pp. 1381-3. Date of Electronic Publication: 2010 Apr 05.
Publication Year :: 2010
Abstract: Summary: Payao is a community-based, collaborative web service platform for gene-regulatory and biochemical pathway model curation. The system combines Web 2.0 technologies and online model visualization functions to enable a collaborative community to annotate and curate biological models. Payao reads the models in Systems Biology Markup Language format, displays them with CellDesigner, a process diagram editor, which complies with the Systems Biology Graphical Notation, and provides an interface for model enrichment (adding tags and comments to the models) for the access-controlled community members.<br />Availability and Implementation: Freely available for model curation service at http://www.payaologue.org. Web site implemented in Seaser Framework 2.0 with S2Flex2, MySQL 5.0 and Tomcat 5.5, with all major browsers supported.<br />Contact: kitano@sbi.jp