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A genome-wide association study identifies new psoriasis susceptibility loci and an interaction between HLA-C and ERAP1.

Authors :
Strange A
Capon F
Spencer CC
Knight J
Weale ME
Allen MH
Barton A
Band G
Bellenguez C
Bergboer JG
Blackwell JM
Bramon E
Bumpstead SJ
Casas JP
Cork MJ
Corvin A
Deloukas P
Dilthey A
Duncanson A
Edkins S
Estivill X
Fitzgerald O
Freeman C
Giardina E
Gray E
Hofer A
Hüffmeier U
Hunt SE
Irvine AD
Jankowski J
Kirby B
Langford C
Lascorz J
Leman J
Leslie S
Mallbris L
Markus HS
Mathew CG
McLean WH
McManus R
Mössner R
Moutsianas L
Naluai AT
Nestle FO
Novelli G
Onoufriadis A
Palmer CN
Perricone C
Pirinen M
Plomin R
Potter SC
Pujol RM
Rautanen A
Riveira-Munoz E
Ryan AW
Salmhofer W
Samuelsson L
Sawcer SJ
Schalkwijk J
Smith CH
Ståhle M
Su Z
Tazi-Ahnini R
Traupe H
Viswanathan AC
Warren RB
Weger W
Wolk K
Wood N
Worthington J
Young HS
Zeeuwen PL
Hayday A
Burden AD
Griffiths CE
Kere J
Reis A
McVean G
Evans DM
Brown MA
Barker JN
Peltonen L
Donnelly P
Trembath RC
Source :
Nature genetics [Nat Genet] 2010 Nov; Vol. 42 (11), pp. 985-90. Date of Electronic Publication: 2010 Oct 17.
Publication Year :
2010

Abstract

To identify new susceptibility loci for psoriasis, we undertook a genome-wide association study of 594,224 SNPs in 2,622 individuals with psoriasis and 5,667 controls. We identified associations at eight previously unreported genomic loci. Seven loci harbored genes with recognized immune functions (IL28RA, REL, IFIH1, ERAP1, TRAF3IP2, NFKBIA and TYK2). These associations were replicated in 9,079 European samples (six loci with a combined P < 5 × 10⁻⁸ and two loci with a combined P < 5 × 10⁻⁷). We also report compelling evidence for an interaction between the HLA-C and ERAP1 loci (combined P = 6.95 × 10⁻⁶). ERAP1 plays an important role in MHC class I peptide processing. ERAP1 variants only influenced psoriasis susceptibility in individuals carrying the HLA-C risk allele. Our findings implicate pathways that integrate epidermal barrier dysfunction with innate and adaptive immune dysregulation in psoriasis pathogenesis.

Details

Language :
English
ISSN :
1546-1718
Volume :
42
Issue :
11
Database :
MEDLINE
Journal :
Nature genetics
Publication Type :
Academic Journal
Accession number :
20953190
Full Text :
https://doi.org/10.1038/ng.694