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Description of a novel actinobacterium Microbacterium assamensis sp. nov., isolated from water sample collected from the river Brahmaputra, Assam, India.
- Source :
-
Current microbiology [Curr Microbiol] 2011 Mar; Vol. 62 (3), pp. 1039-43. Date of Electronic Publication: 2010 Nov 21. - Publication Year :
- 2011
-
Abstract
- A Gram-positive, yellow pigmented actinobacterium, strain S2-48(T) was isolated from water sample collected from the river Brahmaputra, Assam, India and subjected to a polyphasic taxonomic study. Most of the physiological and biochemical properties, major fatty acids (C(15:0) Anteiso, iso C(16:0) and C(17:0) Anteiso), estimated DNA G+C content (70.2 mol%) and 16S rRNA gene sequence analysis showed that strain S2-48(T) belonged to the genus Microbacterium. Strain S2-48(T) exhibited highest 16S rRNA gene sequence similarity with Microbacterium testaceum (97.0%); however, the DNA-DNA relatedness value between strain S2-48(T) and M. testaceum was 9.1%. On the basis of differential phenotypic characteristics and genotypic distinctiveness, strain S2-48(T) should be classified within the genus Microbacterium as a novel species, for which the name Microbacterium assamensis is proposed. The type strain is S2-48(T) (=MTCC 10486(T) = DSM 23998(T)).
- Subjects :
- Actinomycetales genetics
Bacterial Typing Techniques
Base Composition
Cluster Analysis
DNA, Bacterial chemistry
DNA, Bacterial genetics
DNA, Ribosomal chemistry
DNA, Ribosomal genetics
Fatty Acids analysis
India
Molecular Sequence Data
Nucleic Acid Hybridization
Phylogeny
Pigments, Biological metabolism
RNA, Ribosomal, 16S genetics
Rivers
Sequence Analysis, DNA
Actinomycetales classification
Actinomycetales isolation & purification
Fresh Water microbiology
Subjects
Details
- Language :
- English
- ISSN :
- 1432-0991
- Volume :
- 62
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Current microbiology
- Publication Type :
- Academic Journal
- Accession number :
- 21104080
- Full Text :
- https://doi.org/10.1007/s00284-010-9822-z