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Identification, replication, and fine-mapping of Loci associated with adult height in individuals of african ancestry.

Authors :
N'Diaye A
Chen GK
Palmer CD
Ge B
Tayo B
Mathias RA
Ding J
Nalls MA
Adeyemo A
Adoue V
Ambrosone CB
Atwood L
Bandera EV
Becker LC
Berndt SI
Bernstein L
Blot WJ
Boerwinkle E
Britton A
Casey G
Chanock SJ
Demerath E
Deming SL
Diver WR
Fox C
Harris TB
Hernandez DG
Hu JJ
Ingles SA
John EM
Johnson C
Keating B
Kittles RA
Kolonel LN
Kritchevsky SB
Le Marchand L
Lohman K
Liu J
Millikan RC
Murphy A
Musani S
Neslund-Dudas C
North KE
Nyante S
Ogunniyi A
Ostrander EA
Papanicolaou G
Patel S
Pettaway CA
Press MF
Redline S
Rodriguez-Gil JL
Rotimi C
Rybicki BA
Salako B
Schreiner PJ
Signorello LB
Singleton AB
Stanford JL
Stram AH
Stram DO
Strom SS
Suktitipat B
Thun MJ
Witte JS
Yanek LR
Ziegler RG
Zheng W
Zhu X
Zmuda JM
Zonderman AB
Evans MK
Liu Y
Becker DM
Cooper RS
Pastinen T
Henderson BE
Hirschhorn JN
Lettre G
Haiman CA
Source :
PLoS genetics [PLoS Genet] 2011 Oct; Vol. 7 (10), pp. e1002298. Date of Electronic Publication: 2011 Oct 06.
Publication Year :
2011

Abstract

Adult height is a classic polygenic trait of high heritability (h(2) approximately 0.8). More than 180 single nucleotide polymorphisms (SNPs), identified mostly in populations of European descent, are associated with height. These variants convey modest effects and explain approximately10% of the variance in height. Discovery efforts in other populations, while limited, have revealed loci for height not previously implicated in individuals of European ancestry. Here, we performed a meta-analysis of genome-wide association (GWA) results for adult height in 20,427 individuals of African ancestry with replication in up to 16,436 African Americans. We found two novel height loci (Xp22-rs12393627, P = 3.4×10(-12) and 2p14-rs4315565, P = 1.2×10(-8)). As a group, height associations discovered in European-ancestry samples replicate in individuals of African ancestry (P = 1.7×10(-4) for overall replication). Fine-mapping of the European height loci in African-ancestry individuals showed an enrichment of SNPs that are associated with expression of nearby genes when compared to the index European height SNPs (P<0.01). Our results highlight the utility of genetic studies in non-European populations to understand the etiology of complex human diseases and traits.<br />Competing Interests: The authors have declared that no competing interests exist.

Details

Language :
English
ISSN :
1553-7404
Volume :
7
Issue :
10
Database :
MEDLINE
Journal :
PLoS genetics
Publication Type :
Academic Journal
Accession number :
21998595
Full Text :
https://doi.org/10.1371/journal.pgen.1002298