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Comparison of PCR protocols for detecting Histoplasma capsulatum DNA through a multicenter study.
- Source :
-
Revista iberoamericana de micologia [Rev Iberoam Micol] 2013 Oct-Dec; Vol. 30 (4), pp. 256-60. Date of Electronic Publication: 2013 Apr 11. - Publication Year :
- 2013
-
Abstract
- Background: A multicenter study was conducted. A panel containing DNA from Histoplasma capsulatum, as well as negative and cross-reaction controls, was sent to five different laboratories, members of the MICOMOL network from CYTED Program.<br />Aims: The objective was to assess the accuracy of different PCR protocols to detect H. capsulatum DNA.<br />Methods: Seven different PCR protocols were tested. They were based on PCR techniques and used unicopy and multicopy targets.<br />Results: Most of these protocols (4/7) were able to detect the smallest amounts of fungal DNA (10(2)fg/μl). Overall sensitivity was 86% and specificity was 100%. The protocol based on a unicopy target (SCAR220) presented lower sensitivity (43%) but 100% specificity. The real-time protocols tested were highly reproducible, sensitive, and specific. Neither false positives nor cross-reactions were detected in any protocol.<br />Conclusions: All laboratories were able to amplify H. capsulatum DNA, and real-time PCR seems to be a promising tool to efficiently detect this pathogen in clinical samples.<br /> (Copyright © 2012 Revista Iberoamericana de Micología. Published by Elsevier Espana. All rights reserved.)
- Subjects :
- Fungal Proteins genetics
Genetic Markers
Histoplasma isolation & purification
Laboratories organization & administration
Laboratory Proficiency Testing
Latin America
Real-Time Polymerase Chain Reaction methods
Reproducibility of Results
Sensitivity and Specificity
Single-Blind Method
Spain
DNA, Fungal analysis
Histoplasma genetics
Mycology methods
Polymerase Chain Reaction methods
Subjects
Details
- Language :
- English
- ISSN :
- 2173-9188
- Volume :
- 30
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- Revista iberoamericana de micologia
- Publication Type :
- Academic Journal
- Accession number :
- 23583717
- Full Text :
- https://doi.org/10.1016/j.riam.2013.03.004