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Identifying radiation exposure biomarkers from mouse blood transcriptome.
- Source :
-
International journal of bioinformatics research and applications [Int J Bioinform Res Appl] 2013; Vol. 9 (4), pp. 365-85. - Publication Year :
- 2013
-
Abstract
- Ionising radiation is a pleiotropic stress agent that may induce a variety of adverse effects. Molecular biomarker approaches possess promise to assess radiation exposure, however, the pleiotropic nature of ionising radiation induced transcriptional responses and the historically poor inter-laboratory performance of omics-derived biomarkers serve as barriers to identification of unequivocal biomarker sets. Here, we present a whole-genome survey of the murine transcriptomic response to physiologically relevant radiation doses, 2 Gy and 8 Gy. We used this dataset with the Random Forest algorithm to correctly classify independently generated data and to identify putative metabolite biomarkers for radiation exposure.
Details
- Language :
- English
- ISSN :
- 1744-5485
- Volume :
- 9
- Issue :
- 4
- Database :
- MEDLINE
- Journal :
- International journal of bioinformatics research and applications
- Publication Type :
- Academic Journal
- Accession number :
- 23797995
- Full Text :
- https://doi.org/10.1504/IJBRA.2013.054701