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Concentration of enteric viruses from tap water using an anion exchange resin-based method.
- Source :
-
Journal of virological methods [J Virol Methods] 2014 Sep; Vol. 206, pp. 95-8. Date of Electronic Publication: 2014 Jun 06. - Publication Year :
- 2014
-
Abstract
- Detecting low concentrations of enteric viruses in water is needed for public health-related monitoring and control purposes. Thus, there is a need for sensitive, rapid and cost effective enteric viral concentration methods compatible with downstream molecular detection. Here, a virus concentration method based on adsorption of the virus to an anion exchange resin and direct isolation of nucleic acids is presented. Ten liter samples of tap water spiked with different concentrations (10-10,000 TCID50/10 L) of human adenovirus 40 (HAdV-40), hepatitis A virus (HAV) or rotavirus (RV) were concentrated and detected by real time PCR or real time RT-PCR. This method improved viral detection compared to direct testing of spiked water samples where the ΔCt was 12.1 for AdV-40 and 4.3 for HAV. Direct detection of RV in water was only possible for one of the three replicates tested (Ct of 37), but RV detection was improved using the resin method (all replicates tested positive with an average Ct of 30, n=3). The limit of detection of the method was 10 TCID50/10 L for HAdV-40 and HAV, and 100 TCID50/10 L of water for RV. These results compare favorably with detection limits reported for more expensive and laborious methods.<br /> (Copyright © 2014 Elsevier B.V. All rights reserved.)
- Subjects :
- DNA, Viral analysis
DNA, Viral genetics
Humans
RNA, Viral analysis
RNA, Viral genetics
Real-Time Polymerase Chain Reaction
Reverse Transcriptase Polymerase Chain Reaction
Sensitivity and Specificity
Adenoviruses, Human isolation & purification
Anion Exchange Resins
Chromatography, Ion Exchange methods
Drinking Water virology
Hepatitis A virus isolation & purification
Rotavirus isolation & purification
Virology methods
Subjects
Details
- Language :
- English
- ISSN :
- 1879-0984
- Volume :
- 206
- Database :
- MEDLINE
- Journal :
- Journal of virological methods
- Publication Type :
- Academic Journal
- Accession number :
- 24911889
- Full Text :
- https://doi.org/10.1016/j.jviromet.2014.05.025