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The complete validated mitochondrial genome of the yellownose skate Zearaja chilensis (Guichenot 1848) (Rajiformes, Rajidae).
- Source :
-
Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis [Mitochondrial DNA A DNA Mapp Seq Anal] 2016; Vol. 27 (2), pp. 1227-8. Date of Electronic Publication: 2014 Aug 04. - Publication Year :
- 2016
-
Abstract
- The yellownose skate Zearaja chilensis is endemic to South America. The species is the target of a valuable commercial fishery in Chile, but is highly susceptible to over-exploitation. The complete mitochondrial genome was described from 694,593 sequences obtained using Ion Torrent Next Generation Sequencing. The total length of the mitogenome was 16,909 bp, comprising 2 rRNAs, 13 protein-coding genes, 22 tRNAs and 2 non-coding regions. Comparison between the proposed mitogenome and one previously described from "raw fish fillets from a skate speciality restaurant in Seoul, Korea" resulted in 97.4% similarity, rather than approaching 100% similarity as might be expected. The 2.6% dissimilarity may indicate the presence of two separate stocks or two different species of, ostensibly, Z. chilensis in South America and highlights the need for caution when using genetic resources without a taxonomic reference or a voucher specimen.
- Subjects :
- Animals
Base Composition genetics
Base Sequence
Genome Size genetics
High-Throughput Nucleotide Sequencing
Molecular Sequence Data
RNA, Ribosomal, 16S genetics
RNA, Transfer genetics
South America
DNA, Mitochondrial genetics
Genome, Mitochondrial genetics
Mitochondria genetics
Sequence Analysis, DNA veterinary
Skates, Fish genetics
Subjects
Details
- Language :
- English
- ISSN :
- 2470-1408
- Volume :
- 27
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis
- Publication Type :
- Academic Journal
- Accession number :
- 25090390
- Full Text :
- https://doi.org/10.3109/19401736.2014.945530