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Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus.

Authors :
Biller SJ
Berube PM
Berta-Thompson JW
Kelly L
Roggensack SE
Awad L
Roache-Johnson KH
Ding H
Giovannoni SJ
Rocap G
Moore LR
Chisholm SW
Source :
Scientific data [Sci Data] 2014 Sep 30; Vol. 1, pp. 140034. Date of Electronic Publication: 2014 Sep 30 (Print Publication: 2014).
Publication Year :
2014

Abstract

The marine cyanobacterium Prochlorococcus is the numerically dominant photosynthetic organism in the oligotrophic oceans, and a model system in marine microbial ecology. Here we report 27 new whole genome sequences (2 complete and closed; 25 of draft quality) of cultured isolates, representing five major phylogenetic clades of Prochlorococcus. The sequenced strains were isolated from diverse regions of the oceans, facilitating studies of the drivers of microbial diversity-both in the lab and in the field. To improve the utility of these genomes for comparative genomics, we also define pre-computed clusters of orthologous groups of proteins (COGs), indicating how genes are distributed among these and other publicly available Prochlorococcus genomes. These data represent a significant expansion of Prochlorococcus reference genomes that are useful for numerous applications in microbial ecology, evolution and oceanography.

Details

Language :
English
ISSN :
2052-4463
Volume :
1
Database :
MEDLINE
Journal :
Scientific data
Publication Type :
Academic Journal
Accession number :
25977791
Full Text :
https://doi.org/10.1038/sdata.2014.34