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Initial O₂ Insertion Step of the Tryptophan Dioxygenase Reaction Proposed by a Heme-Modification Study.
- Source :
-
Biochemistry [Biochemistry] 2015 Jun 16; Vol. 54 (23), pp. 3604-16. Date of Electronic Publication: 2015 Jun 02. - Publication Year :
- 2015
-
Abstract
- L-Tryptophan 2,3-dioxygenase (TDO) is a protoheme-containing enzyme that catalyzes the production of N-formylkynurenine by inserting O₂ into the pyrrole ring of L-tryptophan. Although a ferrous-oxy form (Fe²⁺-O₂) has been established to be an obligate intermediate in the reaction, details of the ring opening reaction remain elusive. In this study, the O₂ insertion reaction catalyzed by Pseudomonas TDO (PaTDO) was examined using a heme-modification approach, which allowed us to draw a quantitative correlation between the inductive electronic effects of the heme substituents and the substituent-induced changes in the functional behaviors of the ferrous-oxy form. We succeeded in preparing reconstituted PaTDO with synthetic hemes, which were different with respect to the inductive electron-withdrawing nature of the heme substituents at positions 2 and 4. An increase in the electron-withdrawing power of the heme substituents elevated the redox potential of reconstituted PaTDO, showing that the stronger the electron-withdrawing ability of the heme substituents, the lower the electron density on the heme iron. The decrease in the electron density of the heme iron resulted in a higher frequency shift of the C-O stretch of the heme-bound CO and enhanced the dissociation of O₂ from the ferrous-oxy intermediate. This result was interpreted as being due to weaker π back-donation from the heme iron to the bound CO or O₂. More importantly, the reaction rates of the ferrous-oxy intermediate to oxidize L-Trp were increased with the electron-withdrawing ability of the heme substituents, implying that the more electron-deficient ferrous-oxy heme is favored for the PaTDO-catalyzed oxygenation. On the basis of these results, we propose that the initial step of the dioxygen activation by PaTDO is a direct electrophilic addition of the heme-bound O₂ to the indole ring of L-Trp.
- Subjects :
- Acetylation
Animals
Bacterial Proteins chemistry
Biocatalysis
Camphor 5-Monooxygenase chemistry
Camphor 5-Monooxygenase metabolism
Carbon Dioxide chemistry
Carbon Dioxide metabolism
Delftia acidovorans enzymology
Deuteroporphyrins chemistry
Deuteroporphyrins metabolism
Heme analogs & derivatives
Heme chemistry
Kynurenine chemistry
Kynurenine metabolism
Ligands
Mesoporphyrins chemistry
Mesoporphyrins metabolism
Myoglobin chemistry
Myoglobin metabolism
Oxidation-Reduction
Oxygen chemistry
Tryptophan chemistry
Tryptophan Oxygenase chemistry
Bacterial Proteins metabolism
Heme metabolism
Kynurenine analogs & derivatives
Models, Molecular
Oxygen metabolism
Tryptophan metabolism
Tryptophan Oxygenase metabolism
Subjects
Details
- Language :
- English
- ISSN :
- 1520-4995
- Volume :
- 54
- Issue :
- 23
- Database :
- MEDLINE
- Journal :
- Biochemistry
- Publication Type :
- Academic Journal
- Accession number :
- 25996254
- Full Text :
- https://doi.org/10.1021/acs.biochem.5b00048