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Changes in Postural Syntax Characterize Sensory Modulation and Natural Variation of C. elegans Locomotion.

Authors :
Schwarz RF
Branicky R
Grundy LJ
Schafer WR
Brown AE
Source :
PLoS computational biology [PLoS Comput Biol] 2015 Aug 21; Vol. 11 (8), pp. e1004322. Date of Electronic Publication: 2015 Aug 21 (Print Publication: 2015).
Publication Year :
2015

Abstract

Locomotion is driven by shape changes coordinated by the nervous system through time; thus, enumerating an animal's complete repertoire of shape transitions would provide a basis for a comprehensive understanding of locomotor behaviour. Here we introduce a discrete representation of behaviour in the nematode C. elegans. At each point in time, the worm's posture is approximated by its closest matching template from a set of 90 postures and locomotion is represented as sequences of postures. The frequency distribution of postural sequences is heavy-tailed with a core of frequent behaviours and a much larger set of rarely used behaviours. Responses to optogenetic and environmental stimuli can be quantified as changes in postural syntax: worms show different preferences for different sequences of postures drawn from the same set of templates. A discrete representation of behaviour will enable the use of methods developed for other kinds of discrete data in bioinformatics and language processing to be harnessed for the study of behaviour.

Details

Language :
English
ISSN :
1553-7358
Volume :
11
Issue :
8
Database :
MEDLINE
Journal :
PLoS computational biology
Publication Type :
Academic Journal
Accession number :
26295152
Full Text :
https://doi.org/10.1371/journal.pcbi.1004322