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Differentiation of Campylobacter jejuni and Campylobacter coli Using Multiplex-PCR and High Resolution Melt Curve Analysis.
- Source :
-
PloS one [PLoS One] 2015 Sep 22; Vol. 10 (9), pp. e0138808. Date of Electronic Publication: 2015 Sep 22 (Print Publication: 2015). - Publication Year :
- 2015
-
Abstract
- Campylobacter spp. are important causes of bacterial gastroenteritis in humans in developed countries. Among Campylobacter spp. Campylobacter jejuni (C. jejuni) and C. coli are the most common causes of human infection. In this study, a multiplex PCR (mPCR) and high resolution melt (HRM) curve analysis were optimized for simultaneous detection and differentiation of C. jejuni and C. coli isolates. A segment of the hippuricase gene (hipO) of C. jejuni and putative aspartokinase (asp) gene of C. coli were amplified from 26 Campylobacter isolates and amplicons were subjected to HRM curve analysis. The mPCR-HRM was able to differentiate between C. jejuni and C. coli species. All DNA amplicons generated by mPCR were sequenced. Analysis of the nucleotide sequences from each isolate revealed that the HRM curves were correlated with the nucleotide sequences of the amplicons. Minor variation in melting point temperatures of C. coli or C. jejuni isolates was also observed and enabled some intraspecies differentiation between C. coli and/or C. jejuni isolates. The potential of PCR-HRM curve analysis for the detection and speciation of Campylobacter in additional human clinical specimens and chicken swab samples was also confirmed. The sensitivity and specificity of the test were found to be 100% and 92%, respectively. The results indicated that mPCR followed by HRM curve analysis provides a rapid (8 hours) technique for differentiation between C. jejuni and C. coli isolates.
- Subjects :
- Bacterial Proteins genetics
Campylobacter Infections microbiology
Campylobacter coli classification
Campylobacter jejuni classification
DNA, Bacterial chemistry
Genetic Variation
Genotype
Humans
Molecular Sequence Data
Phylogeny
Sequence Analysis, DNA
Species Specificity
Transition Temperature
Campylobacter coli genetics
Campylobacter jejuni genetics
DNA Barcoding, Taxonomic methods
DNA, Bacterial genetics
Multiplex Polymerase Chain Reaction methods
Subjects
Details
- Language :
- English
- ISSN :
- 1932-6203
- Volume :
- 10
- Issue :
- 9
- Database :
- MEDLINE
- Journal :
- PloS one
- Publication Type :
- Academic Journal
- Accession number :
- 26394042
- Full Text :
- https://doi.org/10.1371/journal.pone.0138808