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Temporal analysis of reassortment and molecular evolution of Cucumber mosaic virus: Extra clues from its segmented genome.
- Source :
-
Virology [Virology] 2016 Jan; Vol. 487, pp. 188-97. Date of Electronic Publication: 2015 Nov 03. - Publication Year :
- 2016
-
Abstract
- Cucumber mosaic virus (CMV) is a damaging pathogen of over 200 mono- and dicotyledonous crop species worldwide. It has the broadest known host range of any virus, but the timescale of its evolution is unknown. To investigate the evolutionary history of this virus, we obtained the genomic sequences of 40 CMV isolates from brassicas sampled in Iran, Turkey and Japan, and combined them with published sequences. Our synonymous ('silent') site analyses revealed that the present CMV population is the progeny of a single ancestor existing 1550-2600 years ago, but that the population mostly radiated 295-545 years ago. We found that the major CMV lineages are not phylogeographically confined, but that recombination and reassortment is restricted to local populations and that no reassortant lineage is more than 251 years old. Our results highlight the different evolutionary patterns seen among viral pathogens of brassica crops across the world.<br /> (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Subjects :
- Base Sequence
Biological Evolution
Cucumovirus growth & development
Cucumovirus isolation & purification
Genetics, Population
Iran
Japan
Phylogeny
Plant Diseases virology
Plant Leaves virology
RNA, Viral genetics
Reassortant Viruses genetics
Recombination, Genetic
Sequence Alignment
Sequence Analysis, RNA
Turkey
Brassica virology
Cucumovirus genetics
Evolution, Molecular
Genome, Viral genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1096-0341
- Volume :
- 487
- Database :
- MEDLINE
- Journal :
- Virology
- Publication Type :
- Academic Journal
- Accession number :
- 26539800
- Full Text :
- https://doi.org/10.1016/j.virol.2015.09.024