Stochastic model of homogeneous coding and latent periodicity in DNA sequences.

Authors :: Chaley M
Kutyrkin V
Source :: Journal of theoretical biology [J Theor Biol] 2016 Feb 07; Vol. 390, pp. 106-16. Date of Electronic Publication: 2015 Nov 30.
Publication Year :: 2016
Abstract: The concept of latent triplet periodicity in coding DNA sequences which has been earlier extensively discussed is confirmed in the result of analysis of a number of eukaryotic genomes, where latent periodicity of a new type, called profile periodicity, is recognized in the CDSs. Original model of Stochastic Homogeneous Organization of Coding (SHOC-model) in textual string is proposed. This model explains the existence of latent profile periodicity and regularity in DNA sequences.<br /> (Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.)