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A betabaculovirus encoding a gp64 homolog.
- Source :
-
BMC genomics [BMC Genomics] 2016 Feb 04; Vol. 17, pp. 94. Date of Electronic Publication: 2016 Feb 04. - Publication Year :
- 2016
-
Abstract
- Background: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil.<br />Results: The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7% encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses.<br />Conclusion: DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.
- Subjects :
- Baculoviridae classification
Baculoviridae isolation & purification
Baculoviridae ultrastructure
Base Composition
Base Sequence
Brazil
Gene Order
Genome, Viral
Genomics
Molecular Sequence Data
Open Reading Frames
Phylogeny
Saccharum virology
Viral Envelope Proteins chemistry
Viral Proteins genetics
Baculoviridae genetics
Viral Envelope Proteins genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1471-2164
- Volume :
- 17
- Database :
- MEDLINE
- Journal :
- BMC genomics
- Publication Type :
- Academic Journal
- Accession number :
- 26847652
- Full Text :
- https://doi.org/10.1186/s12864-016-2408-9