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Growth against entropy in bacterial metabolism: the phenotypic trade-off behind empirical growth rate distributions in E. coli.

Authors :
Martino DD
Capuani F
Martino AD
Source :
Physical biology [Phys Biol] 2016 May 27; Vol. 13 (3), pp. 036005. Date of Electronic Publication: 2016 May 27.
Publication Year :
2016

Abstract

The solution space of genome-scale models of cellular metabolism provides a map between physically viable flux configurations and cellular metabolic phenotypes described, at the most basic level, by the corresponding growth rates. By sampling the solution space of E. coli's metabolic network, we show that empirical growth rate distributions recently obtained in experiments at single-cell resolution can be explained in terms of a trade-off between the higher fitness of fast-growing phenotypes and the higher entropy of slow-growing ones. Based on this, we propose a minimal model for the evolution of a large bacterial population that captures this trade-off. The scaling relationships observed in experiments encode, in such frameworks, for the same distance from the maximum achievable growth rate, the same degree of growth rate maximization, and/or the same rate of phenotypic change. Being grounded on genome-scale metabolic network reconstructions, these results allow for multiple implications and extensions in spite of the underlying conceptual simplicity.

Details

Language :
English
ISSN :
1478-3975
Volume :
13
Issue :
3
Database :
MEDLINE
Journal :
Physical biology
Publication Type :
Academic Journal
Accession number :
27232645
Full Text :
https://doi.org/10.1088/1478-3975/13/3/036005