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Identification of a Novel Autoimmune Peptide Epitope of Prostein in Prostate Cancer.
- Source :
-
Journal of proteome research [J Proteome Res] 2017 Jan 06; Vol. 16 (1), pp. 204-216. Date of Electronic Publication: 2016 Oct 24. - Publication Year :
- 2017
-
Abstract
- There is a demand for novel targets and approaches to diagnose and treat prostate cancer (PCA). In this context, serum and plasma samples from a total of 609 individuals from two independent patient cohorts were screened for IgG reactivity against a sum of 3833 human protein fragments. Starting from planar protein arrays with 3786 protein fragments to screen 80 patients with and without PCA diagnosis, 161 fragments (4%) were chosen for further analysis based on their reactivity profiles. Adding 71 antigens from literature, the selection of antigens was corroborated for their reactivity in a set of 550 samples using suspension bead arrays. The antigens prostein (SLC45A3), TATA-box binding protein (TBP), and insulin-like growth factor 2 mRNA binding protein 2 (IGF2BP2) showed higher reactivity in PCA patients with late disease compared with early disease. Because of its prostate tissue specificity, we focused on prostein and continued with mapping epitopes of the 66-mer protein fragment using patient samples. Using bead-based assays and 15-mer peptides, a minimal peptide epitope was identified and refined by alanine scanning to the KPxAPFP. Further sequence alignment of this motif revealed homology to transmembrane protein 79 (TMEM79) and TGF-beta-induced factor 2 (TGIF2), thus providing a reasoning for cross-reactivity found in females. A comprehensive workflow to discover and validate IgG reactivity against prostein and homologous targets in human serum and plasma was applied. This study provides useful information when searching for novel biomarkers or drug targets that are guided by the reactivity of the immune system against autoantigens.
- Subjects :
- Aged
Amino Acid Motifs
Antibodies, Neoplasm biosynthesis
Antibodies, Neoplasm chemistry
Autoimmunity
Biomarkers, Tumor immunology
Breast Neoplasms diagnosis
Breast Neoplasms genetics
Breast Neoplasms immunology
Breast Neoplasms metabolism
Case-Control Studies
Cross Reactions
Epitope Mapping
Epitopes genetics
Epitopes immunology
Female
Gene Expression Profiling
Homeodomain Proteins genetics
Homeodomain Proteins immunology
Humans
Immunoglobulin G biosynthesis
Immunoglobulin G chemistry
Insulin-Like Growth Factor II immunology
Male
Membrane Proteins immunology
Middle Aged
Prostatic Neoplasms diagnosis
Prostatic Neoplasms immunology
Prostatic Neoplasms metabolism
Protein Array Analysis
Repressor Proteins genetics
Repressor Proteins immunology
Sequence Alignment
Sequence Homology, Amino Acid
TATA-Box Binding Protein immunology
Biomarkers, Tumor genetics
Epitopes chemistry
Gene Expression Regulation, Neoplastic
Insulin-Like Growth Factor II genetics
Membrane Proteins genetics
Prostatic Neoplasms genetics
TATA-Box Binding Protein genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1535-3907
- Volume :
- 16
- Issue :
- 1
- Database :
- MEDLINE
- Journal :
- Journal of proteome research
- Publication Type :
- Academic Journal
- Accession number :
- 27700103
- Full Text :
- https://doi.org/10.1021/acs.jproteome.6b00620