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Molecular characterisation, genetic variability and detection of a functional polymorphism influencing the promoter activity of OXT gene in goat and sheep.
- Source :
-
The Journal of dairy research [J Dairy Res] 2017 May; Vol. 84 (2), pp. 165-169. Date of Electronic Publication: 2017 Mar 14. - Publication Year :
- 2017
-
Abstract
- The purpose of the study described in this Research Communication was to report the full characterisation of the goat and sheep oxytocin-neurophysin I gene (OXT), their promoters and amino acid sequences. Using the genomic DNA as template, we sequenced and compared the whole OXT gene (3 exons), plus 958/960 nucleotides at the 5' flanking region and 478/477 nucleotides at the 3' flanking region, in 46 sheep and 24 goats belonging to different breeds/genetic types reared in Italy, Greece and Germany. The comparison of the obtained sequences showed a high degree of genetic variability at these loci. In particular, we focused on the SNP g.438T > C as possible example of trans-specific polymorphism. This SNP alters a putative binding site of the transcription factor Oct-1. The set-up of a luciferase assay confirmed that the C variant of this SNP negatively affects the promoter activity of the sheep OXT gene. The results of this study suggest that the SNP g.438T > C might be useful to promote association studies with traits/physiological processes controlled by this hormone.
- Subjects :
- Amino Acid Sequence
Animals
Binding Sites genetics
Genetic Variation genetics
Germany
Greece
Italy
Neurophysins chemistry
Octamer Transcription Factor-1 metabolism
Oxytocin chemistry
Polymorphism, Genetic genetics
Goats genetics
Neurophysins genetics
Oxytocin genetics
Polymorphism, Single Nucleotide genetics
Promoter Regions, Genetic genetics
Sheep genetics
Subjects
Details
- Language :
- English
- ISSN :
- 1469-7629
- Volume :
- 84
- Issue :
- 2
- Database :
- MEDLINE
- Journal :
- The Journal of dairy research
- Publication Type :
- Academic Journal
- Accession number :
- 28290268
- Full Text :
- https://doi.org/10.1017/S0022029917000097