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Identification of PARP14 inhibitors using novel methods for detecting auto-ribosylation.
- Source :
-
Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2017 May 06; Vol. 486 (3), pp. 626-631. Date of Electronic Publication: 2017 Mar 14. - Publication Year :
- 2017
-
Abstract
- Poly(ADP-ribose) polymerases (PARPs) use nicotinamide adenine dinucleotide (NAD <superscript>+</superscript> ) as a co-substrate to transfer ADP-ribose when it releases nicotinamide as the metabolized product. Enzymes of the PARP family play key roles in detecting and repairing DNA, modifying chromatin, regulating transcription, controlling energy metabolism, and inducing cell death. PARP14, the original member of the PARP family, has been reported to be associated with the development of inflammatory diseases and various cancer types, making it a potential therapeutic target. In this study, we purified the macrodomain-containing PARP14 enzyme and established an assay for detecting the auto-ribosylation activity of PARP14 using RapidFire high-throughput mass spectrometry and immunoradiometric assay using [ <superscript>3</superscript> H]NAD <superscript>+</superscript> . Subsequently, we performed high-throughput screening using the assays and identified small-molecule hit compounds, which showed NAD <superscript>+</superscript> -competitive and PARP14-selective inhibitory activities. Co-crystal structures of PARP14 with certain hit compounds revealed that the inhibitors bind to the NAD <superscript>+</superscript> -binding site. Finally, we confirmed that the hit compounds interacted with intracellular PARP14 by a cell-based protein stabilization assay. Thus, we successfully identified primary candidate compounds for further investigation.<br /> (Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Subjects :
- Amino Acid Motifs
Binding Sites
Cloning, Molecular
Crystallography, X-Ray
Escherichia coli genetics
Escherichia coli metabolism
Gene Expression
High-Throughput Screening Assays
Humans
Kinetics
Models, Molecular
Poly(ADP-ribose) Polymerases genetics
Protein Binding
Protein Domains
Protein Structure, Secondary
Radioimmunoassay
Recombinant Proteins chemistry
Recombinant Proteins genetics
Thermodynamics
Enzyme Inhibitors chemistry
Poly(ADP-ribose) Polymerases chemistry
Small Molecule Libraries chemistry
Subjects
Details
- Language :
- English
- ISSN :
- 1090-2104
- Volume :
- 486
- Issue :
- 3
- Database :
- MEDLINE
- Journal :
- Biochemical and biophysical research communications
- Publication Type :
- Academic Journal
- Accession number :
- 28315326
- Full Text :
- https://doi.org/10.1016/j.bbrc.2017.03.052