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Genome-wide association study identifies multiple risk loci for renal cell carcinoma.

Authors :
Scelo G
Purdue MP
Brown KM
Johansson M
Wang Z
Eckel-Passow JE
Ye Y
Hofmann JN
Choi J
Foll M
Gaborieau V
Machiela MJ
Colli LM
Li P
Sampson JN
Abedi-Ardekani B
Besse C
Blanche H
Boland A
Burdette L
Chabrier A
Durand G
Le Calvez-Kelm F
Prokhortchouk E
Robinot N
Skryabin KG
Wozniak MB
Yeager M
Basta-Jovanovic G
Dzamic Z
Foretova L
Holcatova I
Janout V
Mates D
Mukeriya A
Rascu S
Zaridze D
Bencko V
Cybulski C
Fabianova E
Jinga V
Lissowska J
Lubinski J
Navratilova M
Rudnai P
Szeszenia-Dabrowska N
Benhamou S
Cancel-Tassin G
Cussenot O
Baglietto L
Boeing H
Khaw KT
Weiderpass E
Ljungberg B
Sitaram RT
Bruinsma F
Jordan SJ
Severi G
Winship I
Hveem K
Vatten LJ
Fletcher T
Koppova K
Larsson SC
Wolk A
Banks RE
Selby PJ
Easton DF
Pharoah P
Andreotti G
Freeman LEB
Koutros S
Albanes D
Männistö S
Weinstein S
Clark PE
Edwards TL
Lipworth L
Gapstur SM
Stevens VL
Carol H
Freedman ML
Pomerantz MM
Cho E
Kraft P
Preston MA
Wilson KM
Michael Gaziano J
Sesso HD
Black A
Freedman ND
Huang WY
Anema JG
Kahnoski RJ
Lane BR
Noyes SL
Petillo D
Teh BT
Peters U
White E
Anderson GL
Johnson L
Luo J
Buring J
Lee IM
Chow WH
Moore LE
Wood C
Eisen T
Henrion M
Larkin J
Barman P
Leibovich BC
Choueiri TK
Mark Lathrop G
Rothman N
Deleuze JF
McKay JD
Parker AS
Wu X
Houlston RS
Brennan P
Chanock SJ
Source :
Nature communications [Nat Commun] 2017 Jun 09; Vol. 8, pp. 15724. Date of Electronic Publication: 2017 Jun 09.
Publication Year :
2017

Abstract

Previous genome-wide association studies (GWAS) have identified six risk loci for renal cell carcinoma (RCC). We conducted a meta-analysis of two new scans of 5,198 cases and 7,331 controls together with four existing scans, totalling 10,784 cases and 20,406 controls of European ancestry. Twenty-four loci were tested in an additional 3,182 cases and 6,301 controls. We confirm the six known RCC risk loci and identify seven new loci at 1p32.3 (rs4381241, P=3.1 × 10 <superscript>-10</superscript> ), 3p22.1 (rs67311347, P=2.5 × 10 <superscript>-8</superscript> ), 3q26.2 (rs10936602, P=8.8 × 10 <superscript>-9</superscript> ), 8p21.3 (rs2241261, P=5.8 × 10 <superscript>-9</superscript> ), 10q24.33-q25.1 (rs11813268, P=3.9 × 10 <superscript>-8</superscript> ), 11q22.3 (rs74911261, P=2.1 × 10 <superscript>-10</superscript> ) and 14q24.2 (rs4903064, P=2.2 × 10 <superscript>-24</superscript> ). Expression quantitative trait analyses suggest plausible candidate genes at these regions that may contribute to RCC susceptibility.

Details

Language :
English
ISSN :
2041-1723
Volume :
8
Database :
MEDLINE
Journal :
Nature communications
Publication Type :
Academic Journal
Accession number :
28598434
Full Text :
https://doi.org/10.1038/ncomms15724