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Determinants of the assembly and function of antibody variable domains.

Authors :
Herold EM
John C
Weber B
Kremser S
Eras J
Berner C
Deubler S
Zacharias M
Buchner J
Source :
Scientific reports [Sci Rep] 2017 Sep 25; Vol. 7 (1), pp. 12276. Date of Electronic Publication: 2017 Sep 25.
Publication Year :
2017

Abstract

The antibody Fv module which binds antigen consists of the variable domains V <subscript>L</subscript> and V <subscript>H</subscript> . These exhibit a conserved ß-sheet structure and comprise highly variable loops (CDRs). Little is known about the contributions of the framework residues and CDRs to their association. We exchanged conserved interface residues as well as CDR loops and tested the effects on two Fvs interacting with moderate affinities (K <subscript>D</subscript> s of ~2.5 µM and ~6 µM). While for the rather instable domains, almost all mutations had a negative effect, the more stable domains tolerated a number of mutations of conserved interface residues. Of particular importance for Fv association are V <subscript>L</subscript> P44 and V <subscript>H</subscript> L45. In general, the exchange of conserved residues in the V <subscript>L</subscript> /V <subscript>H</subscript> interface did not have uniform effects on domain stability. Furthermore, the effects on association and antigen binding do not strictly correlate. In addition to the interface, the CDRs modulate the variable domain framework to a significant extent as shown by swap experiments. Our study reveals a complex interplay of domain stability, association and antigen binding including an unexpected strong mutual influence of the domain framework and the CDRs on stability/association on the one side and antigen binding on the other side.

Details

Language :
English
ISSN :
2045-2322
Volume :
7
Issue :
1
Database :
MEDLINE
Journal :
Scientific reports
Publication Type :
Academic Journal
Accession number :
28947772
Full Text :
https://doi.org/10.1038/s41598-017-12519-9